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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs12471722 chr2:114010593 T/C 3.64E-5 112 46.27 34.93 41.77 KM Plot
THYM rs12541036 chr8:82686910 C/A 7.04E-5 112 42.25 36.4 22.5 KM Plot
THYM rs12542216 chr8:82754023 C/T 4.45E-5 113 42.82 35.77 22.5 KM Plot
THYM rs12543093 chr8:82688275 A/T 7.38E-5 112 41.77 41.33 22.5 KM Plot
THYM rs12545418 chr8:82678893 C/G 7.76E-5 111 41.77 36.4 22.5 KM Plot
THYM rs12547835 chr8:82747517 G/A 4.45E-5 113 42.82 35.77 22.5 KM Plot
THYM rs12920774 chr16:24830750 T/C 4.62E-5 112 46.6 27.33 50.1 KM Plot
THYM rs12924246 chr16:24844629 A/G 5.68E-5 111 48 28.8 50.1 KM Plot
THYM rs12927710 chr16:24790282 A/C 4.16E-5 113 46.43 27.33 50.1 KM Plot
THYM rs12989970 chr2:32999043 T/C 1.06E-12 112 49.4 26.57 0.9 KM Plot
THYM rs12996785 chr2:32964993 T/G 1.06E-12 112 49.5 26.2 0.9 KM Plot
THYM rs13015130 chr2:114034952 C/T 6.2E-5 108 49.4 32.7 41.77 KM Plot
THYM rs13021145 chr2:33008116 T/C 0 110 46.07 26.57 0.13 KM Plot
THYM rs13383871 chr2:73631779 T/C 4.23E-6 109 38.13 41.77 12.9 KM Plot
THYM rs13392691 chr2:73748980 G/A 6.61E-5 111 37.13 46.27 32.7 KM Plot